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Protein Ontology Report - mKDM1B

PR:Q8CIG3 - http://purl.obolibrary.org/obo/PR_Q8CIG3
This page represents a class of proteins encompassing all the protein products of the KDM1B gene in mouse .
Ontology Information
PRO ID PR:Q8CIG3 Show OBO stanza / PAF
PRO name lysine-specific histone demethylase 1B (mouse)
Synonyms
PRO-short-label: mKDM1B
EXACT: flavin-containing amine oxidase domain-containing protein 1 (mouse); lysine-specific histone demethylase 2 (mouse)
Gene-based: Aof1; Kdm1b; Lsd2
Definition A lysine-specific histone demethylase 1B that is encoded in the genome of mouse. [OMA:Q8CIG3, PRO:DNx]
PRO Category organism-gene
Parent PR:000003320 lysine-specific histone demethylase 1B
Terms by PRO Category Retrieve All terms OBO Stanza / PAF
Organism-Specific
Category Number of Terms
organism-gene 1
organism-sequence 3
organism-modification 0
Term Hierarchy Visualization DAG     OLS     Cytoscape


Interactive Sequence View Select/align proteoforms across species

Protein Forms
PRO ID & Category Annotation Complex Name Short Label Definition & Comment

Functional Annotation
PRO Term GO Annotation Evidence
PR:Q8CIG3
mKDM1B
participates_in GO:0006349 regulation of gene expression by genomic imprinting PMID:19727073
participates_in GO:0043046 DNA methylation involved in gamete generation PMID:19727073
PR:Q8CIG3-1
mKDM1B/iso:1
capable_of GO:0008270 zinc ion binding PMID:19407342
capable_of GO:0050660 flavin adenine dinucleotide binding PMID:19407342
capable_of GO:0034647 histone H3-tri/di/monomethyl-lysine-4 demethylase activity PMID:19727073
capable_of GO:0034647 histone H3-tri/di/monomethyl-lysine-4 demethylase activity PMID:19407342
capable_of GO:0034720 histone H3-K4 demethylation PMID:19407342
located_in GO:0005634 nucleus PMID:19727073
participates_in GO:0034720 histone H3-K4 demethylation PMID:19727073
Biological Process GO Term Protein Forms & Complexes Evidence
GO:0006349 regulation of gene expression by genomic imprinting PR:Q8CIG3 mKDM1B

PMID:19727073
GO:0043046 DNA methylation involved in gamete generation PR:Q8CIG3 mKDM1B

PMID:19727073
GO:0034720 histone H3-K4 demethylation PR:Q8CIG3-1 mKDM1B/iso:1

PMID:19727073
Cellular Location GO Term Protein Forms & Complexes Evidence
GO:0005634 nucleus PR:Q8CIG3-1 mKDM1B/iso:1

PMID:19727073

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