[Term]
id: PR:P62984
name: ubiquitin-60S ribosomal protein L40 (mouse)
def: "A ubiquitin-60S ribosomal protein L40 that is encoded in the genome of mouse." [OMA:P62984, PRO:DNx]
comment: Category=organism-gene.
synonym: "Uba52" RELATED Gene-based [UniProtKB:P62984]
synonym: "Ubcep2" RELATED Gene-based [UniProtKB:P62984]
synonym: "mUBA52" EXACT PRO-short-label [PRO:DNx]
synonym: "ubiquitin A-52 residue ribosomal protein fusion product 1 (mouse)" EXACT [UniProtKB:P62984]
xref: UniProtKB:P62984
intersection_of: only_in_taxon NCBITaxon:10090 ! Mus musculus
intersection_of: PR:000016954 ! ubiquitin-60S ribosomal protein L40
relationship: has_gene_template MGI:98887 ! Uba52 (mouse)

[Term]
id: PR:P62986
name: ubiquitin-60S ribosomal protein L40 (rat)
def: "A ubiquitin-60S ribosomal protein L40 that is encoded in the genome of rat." [OMA:P62986, PANTHER:PTHR24691:SF3, PRO:DNx]
comment: Category=organism-gene.
synonym: "Uba52" RELATED Gene-based [UniProtKB:P62986]
synonym: "Ubcep2" RELATED Gene-based [UniProtKB:P62986]
synonym: "rUBA52" EXACT PRO-short-label [PRO:DNx]
synonym: "ubiquitin A-52 residue ribosomal protein fusion product 1 (rat)" EXACT [UniProtKB:P62986]
xref: UniProtKB:P62986
intersection_of: only_in_taxon NCBITaxon:10116 ! Rattus norvegicus
intersection_of: PR:000016954 ! ubiquitin-60S ribosomal protein L40
relationship: has_gene_template RGD:68344 ! Uba52 (rat)

[Term]
id: PR:P62987
name: ubiquitin-60S ribosomal protein L40 (human)
def: "A ubiquitin-60S ribosomal protein L40 that is encoded in the genome of human." [PRO:DNx, UniProtKB:P62987]
comment: Category=organism-gene.
synonym: "UBA52" RELATED Gene-based [UniProtKB:P62987]
synonym: "UBCEP2" RELATED Gene-based [UniProtKB:P62987]
synonym: "hUBA52" EXACT PRO-short-label [PRO:DNx]
synonym: "CEP52 (human)" EXACT [UniProtKB:P62987]
synonym: "ubiquitin A-52 residue ribosomal protein fusion product 1 (human)" EXACT [UniProtKB:P62987]
xref: UniProtKB:P62987
xref: Reactome:R-HSA-8853517 "PR:P62987 located_in GO:0005829"
intersection_of: only_in_taxon NCBITaxon:9606 ! Homo sapiens
intersection_of: PR:000016954 ! ubiquitin-60S ribosomal protein L40
relationship: has_gene_template HGNC:12458 ! UBA52 (human)

[Term]
id: PR:000040056
name: ubiquitin-60S ribosomal protein L40 isoform 1
def: "A ubiquitin-60S ribosomal protein L40 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P62987-1 or a 1:1 ortholog thereof." [PRO:DNx]
comment: Category=sequence.
synonym: "UBA52/iso:1" EXACT PRO-short-label [PRO:DNx]
is_a: PR:000016954 ! ubiquitin-60S ribosomal protein L40

[Term]
id: PR:P49632-1
name: ubiquitin-60S ribosomal protein L40 isoform 1 (worm)
def: "A ubiquitin-60S ribosomal protein L40 isoform 1 that is encoded in the genome of worm." [PRO:DNx]
comment: Category=organism-sequence.
synonym: "UBA52/iso:1 (worm)" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P49632-1
intersection_of: only_in_taxon NCBITaxon:6239 ! Caenorhabditis elegans
intersection_of: PR:000040056 ! ubiquitin-60S ribosomal protein L40 isoform 1

[Term]
id: PR:000036926
name: ubiquitin-60S ribosomal protein L40 (yeast)
def: "A ubiquitin-60S ribosomal protein L40 that is encoded in the genome of yeast. A translation product of the yeast RPL40A or RPL40B genes." [PRO:DAN]
comment: Category=organism-family. Note: The RPL40A and RPL40B genes encode identical proteins.
synonym: "RPL40A" NARROW Gene-based [PRO:DAN]
synonym: "RPL40B" NARROW Gene-based [PRO:DAN]
synonym: "yRPL40" EXACT PRO-short-label [PRO:DAN]
intersection_of: only_in_taxon NCBITaxon:559292 ! Saccharomyces cerevisiae S288C
intersection_of: PR:000016954 ! ubiquitin-60S ribosomal protein L40
union_of: PR:P0CH08 ! ubiquitin-60S ribosomal protein L40 A (yeast)
union_of: PR:P0CH09 ! ubiquitin-60S ribosomal protein L40 B (yeast)

[Term]
id: PR:P62987-1
name: ubiquitin-60S ribosomal protein L40 isoform 1 (human)
def: "A ubiquitin-60S ribosomal protein L40 isoform 1 that is encoded in the genome of human." [PRO:DNx]
comment: Category=organism-sequence.
synonym: "hUBA52/iso:1" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P62987-1
intersection_of: only_in_taxon NCBITaxon:9606 ! Homo sapiens
intersection_of: PR:000040056 ! ubiquitin-60S ribosomal protein L40 isoform 1

[Term]
id: PR:P18101
name: ubiquitin-60S ribosomal protein L40 (fruit fly)
def: "A ubiquitin-60S ribosomal protein L40 that is encoded in the genome of fruit fly." [OMA:P18101, PANTHER:PTHR24691:SF3, PRO:DNx]
comment: Category=organism-gene.
synonym: "RpL40" RELATED Gene-based [UniProtKB:P18101]
synonym: "Ubi-f" RELATED Gene-based [UniProtKB:P18101]
synonym: "CG2960" RELATED Gene-based [UniProtKB:P18101]
synonym: "UBI-F52" RELATED Gene-based [UniProtKB:P18101]
synonym: "fly-UBA52" EXACT PRO-short-label [PRO:DNx]
synonym: "CEP52 (fruit fly)" EXACT [UniProtKB:P18101]
xref: UniProtKB:P18101
intersection_of: only_in_taxon NCBITaxon:7227 ! Drosophila melanogaster
intersection_of: PR:000016954 ! ubiquitin-60S ribosomal protein L40
relationship: has_gene_template FlyBase:FBgn0003941 ! RpL40 (fruit fly)

[Term]
id: PR:P49632
name: ubiquitin-60S ribosomal protein L40 (worm)
def: "A ubiquitin-60S ribosomal protein L40 that is encoded in the genome of worm." [OMA:P49632, PRO:DNx]
comment: Category=organism-gene.
synonym: "ubib" RELATED Gene-based [UniProtKB:P49632]
synonym: "ubq-2" RELATED Gene-based [UniProtKB:P49632]
synonym: "ZK1010.1" RELATED Gene-based [UniProtKB:P49632]
synonym: "CEP52 (worm)" EXACT [UniProtKB:P49632]
synonym: "UBA52 (worm)" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P49632
intersection_of: only_in_taxon NCBITaxon:6239 ! Caenorhabditis elegans
intersection_of: PR:000016954 ! ubiquitin-60S ribosomal protein L40
relationship: has_gene_template WormBase:WBGene00006728 ! ubq-2 (worm)

[Term]
id: PR:P0CH06
name: ubiquitin-60S ribosomal protein L40-1 (Schizosaccharomyces pombe 972h-)
def: "A ubiquitin-60S ribosomal protein L40 that is encoded in the genome of Schizosaccharomyces pombe 972h-." [OMA:P0CH06, PRO:DAN]
comment: Category=organism-gene.
synonym: "ubi1" RELATED Gene-based [UniProtKB:P0CH06]
synonym: "SPAC11G7.04" RELATED Gene-based [UniProtKB:P0CH06]
synonym: "Spom972h-ubi1" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P0CH06
intersection_of: only_in_taxon NCBITaxon:284812 ! Schizosaccharomyces pombe 972h-
intersection_of: PR:000016954 ! ubiquitin-60S ribosomal protein L40
relationship: has_gene_template PomBase:SPAC11G7.04 ! ubi1 (Schizosaccharomyces pombe)

[Term]
id: PR:000016954
name: ubiquitin-60S ribosomal protein L40
def: "A protein that is a translation product of the human UBA52 gene or a 1:1 ortholog thereof." [PRO:DNx]
comment: Category=gene.
synonym: "CEP52" EXACT []
synonym: "UBA52" EXACT PRO-short-label [PRO:DNx]
synonym: "UBCEP2" RELATED Gene-based []
synonym: "60S ribosomal protein L40" RELATED []
synonym: "ubiquitin A-52 residue ribosomal protein fusion product 1" EXACT []
is_a: PR:000000001 ! protein

[Term]
id: PR:B9DHA6
name: ubiquitin-60S ribosomal protein L40-1 (Arabidopsis thaliana)
def: "A ubiquitin-60S ribosomal protein L40 that is encoded in the genome of Arabidopsis thaliana." [OMA:B9DHA6, PRO:DNx]
comment: Category=organism-gene.
synonym: "UBQ2" RELATED Gene-based [UniProtKB:B9DHA6]
synonym: "RPL40A" RELATED Gene-based [UniProtKB:B9DHA6]
synonym: "At-UBA52" EXACT PRO-short-label [PRO:DNx]
synonym: "F9C22.10" RELATED Gene-based [UniProtKB:B9DHA6]
synonym: "At2g36170" RELATED Gene-based [UniProtKB:B9DHA6]
xref: UniProtKB:B9DHA6
intersection_of: only_in_taxon NCBITaxon:3702 ! Arabidopsis thaliana
intersection_of: PR:000016954 ! ubiquitin-60S ribosomal protein L40
relationship: has_gene_template Araport:AT2G36170 ! RPL40A (Arabidopsis thaliana)

[Term]
id: PR:P0CH08
name: ubiquitin-60S ribosomal protein L40 A (yeast)
def: "A ubiquitin-60S ribosomal protein L40 (yeast) that is a translation product of the RPL40A gene in yeast." [PRO:DAN, UniProtKB:P0CH08]
comment: Category=organism-gene. Note: The proteins encoded by RPL40A (this class) and RPL40B (PR:P0CH09) are identical.
synonym: "UBI1" RELATED Gene-based [UniProtKB:P0CH08]
synonym: "RPL40A" RELATED Gene-based [UniProtKB:P0CH08]
synonym: "YIL148W" RELATED Gene-based [UniProtKB:P0CH08]
synonym: "yRPL40A" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P0CH08
intersection_of: only_in_taxon NCBITaxon:559292 ! Saccharomyces cerevisiae S288C
intersection_of: PR:000036926 ! ubiquitin-60S ribosomal protein L40 (yeast)
intersection_of: has_gene_template SGD:S000001410 ! RPL40A (yeast)

[Term]
id: PR:P0CH09
name: ubiquitin-60S ribosomal protein L40 B (yeast)
def: "A ubiquitin-60S ribosomal protein L40 (yeast) that is a translation product of the RPL40B gene in yeast." [PRO:DAN, UniProtKB:P0CH09]
comment: Category=organism-gene. Note: The proteins encoded by RPL40A (PR:P0CH08) and RPL40B (this class) are identical.
synonym: "UBI2" RELATED Gene-based [UniProtKB:P0CH09]
synonym: "RPL40B" RELATED Gene-based [UniProtKB:P0CH09]
synonym: "YKR094C" RELATED Gene-based [UniProtKB:P0CH09]
synonym: "yRPL40B" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P0CH09
intersection_of: only_in_taxon NCBITaxon:559292 ! Saccharomyces cerevisiae S288C
intersection_of: PR:000036926 ! ubiquitin-60S ribosomal protein L40 (yeast)
intersection_of: has_gene_template SGD:S000001802 ! RPL40B (yeast)

[Term]
id: PR:P18101-1
name: ubiquitin-60S ribosomal protein L40 isoform 1 (fruit fly)
def: "A ubiquitin-60S ribosomal protein L40 isoform 1 that is encoded in the genome of fruit fly." [PRO:DNx]
comment: Category=organism-sequence.
synonym: "fly-UBA52/iso:1" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P18101-1
intersection_of: only_in_taxon NCBITaxon:7227 ! Drosophila melanogaster
intersection_of: PR:000040056 ! ubiquitin-60S ribosomal protein L40 isoform 1

[Term]
id: PR:P14794
name: ubiquitin-60S ribosomal protein L40 (Dictyostelium discoideum)
def: "A ubiquitin-60S ribosomal protein L40 that is encoded in the genome of Dictyostelium discoideum." [OMA:P14794, PRO:DNx]
comment: Category=organism-gene.
synonym: "ubqB" RELATED Gene-based [UniProtKB:P14794]
synonym: "Dicty-UBA52" EXACT PRO-short-label [PRO:DNx]
synonym: "DDB_G0280755" RELATED Gene-based [UniProtKB:P14794]
synonym: "ubiquitin A-52 residue ribosomal protein fusion product 1 (Dictyostelium discoideum)" EXACT [UniProtKB:P14794]
xref: UniProtKB:P14794
intersection_of: only_in_taxon NCBITaxon:44689 ! Dictyostelium discoideum
intersection_of: PR:000016954 ! ubiquitin-60S ribosomal protein L40
relationship: has_gene_template dictyBase:DDB_G0280755 ! ubqB (Dictyostelium discoideum)

[Term]
id: PR:000035723
name: ubiquitin (UBA52) (human)
def: "A ubiquitin (UBA52) in human. UniProtKB:P62987, 1-76." [PRO:CNA]
comment: Category=organism-modification.
synonym: "PRO_0000396433" EXACT PRO-proteoform-ftid [PRO:DNx]
synonym: "hUBA52/Clv:ubiq" EXACT PRO-short-label [PRO:DAN]
synonym: "UniProtKB:P62987, 1-76" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-939189 "PR:000035723 located_in GO:0010008"
xref: Reactome:R-HSA-939203 "PR:000035723 located_in GO:0005829"
xref: Reactome:R-HSA-939236 "PR:000035723 located_in GO:0030666"
xref: Reactome:R-HSA-939844 "PR:000035723 located_in GO:0005654"
xref: Reactome:R-HSA-3149452 "PR:000035723 located_in GO:0005886"
xref: TDR:12306
intersection_of: only_in_taxon NCBITaxon:9606 ! Homo sapiens
intersection_of: PR:000035722 ! ubiquitin (UBA52)

[Term]
id: PR:000035722
name: ubiquitin (UBA52)
def: "A ubiquitin-60S ribosomal protein L40 that has been processed by proteolytic cleavage. This form is the N-terminal region consisting of the Ubiquitin (Pfam:PF00240) domain. Example: UniProtKB:P62987, 1-76." [PRO:CNA]
comment: Category=modification.
synonym: "UBA52/Clv:ubiq" EXACT PRO-short-label [PRO:DAN]
is_a: PR:000016954 ! ubiquitin-60S ribosomal protein L40
relationship: output_of GO:0016485 ! protein processing

[Term]
id: PR:000035725
name: 60S ribosomal protein L40 (human)
def: "A 60S ribosomal protein L40 in human. UniProtKB:P62987, 77-128." [PRO:CNA]
comment: Category=organism-modification.
synonym: "PRO_0000396434" EXACT PRO-proteoform-ftid [PRO:DNx]
synonym: "hUBA52/Clv:RPL40" EXACT PRO-short-label [PRO:DAN]
synonym: "UniProtKB:P62987, 77-128" EXACT PRO-proteoform-std [PRO:DNx]
xref: TDR:13610
xref: Reactome:R-HSA-72476 "PR:000035725 located_in GO:0005829"
intersection_of: only_in_taxon NCBITaxon:9606 ! Homo sapiens
intersection_of: PR:000035724 ! 60S ribosomal protein L40

[Term]
id: PR:000035724
name: 60S ribosomal protein L40
def: "A ubiquitin-60S ribosomal protein L40 that has been processed by proteolytic cleavage to yield the C-terminal region consisting of the Ribosomal_L40e (Pfam:PF01020) domain. Example: UniProtKB:P62987, 77-128." [PRO:CNA]
comment: Category=modification.
synonym: "UBA52/Clv:RPL40" EXACT PRO-short-label [PRO:DAN]
is_a: PR:000016954 ! ubiquitin-60S ribosomal protein L40
relationship: output_of GO:0016485 ! protein processing

[Term]
id: PR:P62986-1
name: ubiquitin-60S ribosomal protein L40 isoform 1 (rat)
def: "A ubiquitin-60S ribosomal protein L40 isoform 1 that is encoded in the genome of rat." [PRO:DNx]
comment: Category=organism-sequence.
synonym: "rUBA52/iso:1" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P62986-1
intersection_of: only_in_taxon NCBITaxon:10116 ! Rattus norvegicus
intersection_of: PR:000040056 ! ubiquitin-60S ribosomal protein L40 isoform 1