[Term]
id: PR:000039399
name: 60S ribosomal protein L13a isoform 1
def: "A 60S ribosomal protein L13a that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P40429-1 or a 1:1 ortholog thereof." [PRO:DNx]
comment: Category=sequence.
synonym: "RPL13A/iso:1" EXACT PRO-short-label [PRO:DNx]
is_a: PR:000014193 ! 60S ribosomal protein L13a

[Term]
id: PR:P40429
name: 60S ribosomal protein L13a (human)
def: "A 60S ribosomal protein L13a that is encoded in the genome of human." [PRO:DNx, UniProtKB:P40429]
comment: Category=organism-gene.
synonym: "RPL13A" RELATED Gene-based [UniProtKB:P40429]
synonym: "hRPL13A" EXACT PRO-short-label [PRO:DNx]
synonym: "23 kDa highly basic protein (human)" EXACT [UniProtKB:P40429]
synonym: "large ribosomal subunit protein uL13 (human)" EXACT [UniProtKB:P40429]
xref: UniProtKB:P40429
intersection_of: only_in_taxon NCBITaxon:9606 ! Homo sapiens
intersection_of: PR:000014193 ! 60S ribosomal protein L13a
relationship: has_gene_template HGNC:10304 ! RPL13A (human)

[Term]
id: PR:P35427
name: 60S ribosomal protein L13a (rat)
def: "A 60S ribosomal protein L13a that is encoded in the genome of rat." [PANTHER:PTHR11545:SF3, PRO:DNx]
comment: Category=organism-gene.
synonym: "Rpl13a" RELATED Gene-based [UniProtKB:P35427]
synonym: "rRPL13A" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P35427
intersection_of: only_in_taxon NCBITaxon:10116 ! Rattus norvegicus
intersection_of: PR:000014193 ! 60S ribosomal protein L13a
relationship: has_gene_template RGD:628697 ! Rpl13a (rat)

[Term]
id: PR:P19253
name: 60S ribosomal protein L13a (mouse)
def: "A 60S ribosomal protein L13a that is encoded in the genome of mouse." [OMA:P19253, PMID:15489334, PRO:HJD]
comment: Category=organism-gene.
synonym: "P198" RELATED Gene-based [UniProtKB:P19253]
synonym: "Rpl13a" RELATED Gene-based [UniProtKB:P19253]
synonym: "mRPL13A" EXACT PRO-short-label [PRO:DNx]
synonym: "Tstap198-7" RELATED Gene-based [UniProtKB:P19253]
synonym: "Tum-P198 antigen (mouse)" EXACT [UniProtKB:P19253]
synonym: "transplantation antigen P198 (mouse)" EXACT [UniProtKB:P19253]
xref: UniProtKB:P19253
intersection_of: only_in_taxon NCBITaxon:10090 ! Mus musculus
intersection_of: PR:000014193 ! 60S ribosomal protein L13a
relationship: has_gene_template MGI:1351455 ! Rpl13a (mouse)

[Term]
id: PR:000049070
name: 60S ribosomal protein L13a, initiator methionine removed form (human)
def: "A 60S ribosomal protein L13a (human) that has had the initiator methionine removed. UniProtKB:P40429, 2-203." [PRO:DNx, Reactome:R-HSA-72412]
comment: Category=organism-modification.
synonym: "PRO_0000133769" EXACT PRO-proteoform-ftid [PRO:DNx]
synonym: "hRPL13A/InitMet-" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P40429, 2-203" EXACT PRO-proteoform-std [PRO:DNx]
xref: TDR:15401
xref: Reactome:R-HSA-72412 "PR:000049070 located_in GO:0005829"
intersection_of: lacks_part PR:000021937 ! initiator methionine
intersection_of: PR:P40429 ! 60S ribosomal protein L13a (human)
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000021288
name: 60S ribosomal protein L13a, initiator methionine removed form
def: "A 60S ribosomal protein L13a that has had the initiator methionine removed." [PRO:CNA, UniProtKB:P19253]
comment: Category=modification.
synonym: "RPL13A/InitMet-" EXACT PRO-short-label [PRO:DNx]
intersection_of: PR:000014193 ! 60S ribosomal protein L13a
intersection_of: lacks_part PR:000021937 ! initiator methionine

[Term]
id: PR:Q9VNE9
name: 60S ribosomal protein L13a (fruit fly)
def: "A 60S ribosomal protein L13a that is encoded in the genome of fruit fly." [OMA:Q9VNE9, PANTHER:PTHR11545:SF3, PRO:DNx]
comment: Category=organism-gene.
synonym: "CG1475" RELATED Gene-based [UniProtKB:Q9VNE9]
synonym: "RpL13A" RELATED Gene-based [UniProtKB:Q9VNE9]
synonym: "fly-RPL13A" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:Q9VNE9
intersection_of: only_in_taxon NCBITaxon:7227 ! Drosophila melanogaster
intersection_of: PR:000014193 ! 60S ribosomal protein L13a
relationship: has_gene_template FlyBase:FBgn0037351 ! RpL13A (fruit fly)

[Term]
id: PR:Q553M7
name: 60S ribosomal protein L13a (Dictyostelium discoideum)
def: "A 60S ribosomal protein L13a that is encoded in the genome of Dictyostelium discoideum." [OMA:Q553M7, PANTHER:PTHR11545:SF3, PRO:DNx]
comment: Category=organism-gene.
synonym: "rpl13a" RELATED Gene-based [UniProtKB:Q553M7]
synonym: "DDB_G0275881" RELATED Gene-based [UniProtKB:Q553M7]
synonym: "Dicty-RPL13A" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:Q553M7
intersection_of: only_in_taxon NCBITaxon:44689 ! Dictyostelium discoideum
intersection_of: PR:000014193 ! 60S ribosomal protein L13a
relationship: has_gene_template dictyBase:DDB_G0275881 ! rpl13a (Dictyostelium discoideum)

[Term]
id: PR:Q27389
name: 60S ribosomal protein L13a (worm)
def: "A 60S ribosomal protein L13a that is encoded in the genome of worm." [OMA:Q27389, PANTHER:PTHR11545:SF3, PRO:DNx]
comment: Category=organism-gene.
synonym: "rpl-16" RELATED Gene-based [UniProtKB:Q27389]
synonym: "M01F1.2" RELATED Gene-based [UniProtKB:Q27389]
synonym: "RPL13A (worm)" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:Q27389
intersection_of: only_in_taxon NCBITaxon:6239 ! Caenorhabditis elegans
intersection_of: PR:000014193 ! 60S ribosomal protein L13a
relationship: has_gene_template WormBase:WBGene00004428 ! rpl-16 (worm)

[Term]
id: PR:000014193
name: 60S ribosomal protein L13a
def: "A protein that is a translation product of the human RPL13A gene or a 1:1 ortholog thereof." [PRO:DNx]
comment: Category=gene.
synonym: "P198" RELATED Gene-based []
synonym: "RPL13A" EXACT PRO-short-label [PRO:DNx]
synonym: "Tstap198-7" RELATED Gene-based []
synonym: "Tum-P198 antigen" EXACT []
synonym: "23 kDa highly basic protein" EXACT []
synonym: "transplantation antigen P198" EXACT []
is_a: PR:000000001 ! protein

[Term]
id: PR:P40429-1
name: 60S ribosomal protein L13a isoform 1 (human)
def: "A 60S ribosomal protein L13a isoform 1 that is encoded in the genome of human." [PRO:DNx]
comment: Category=organism-sequence.
synonym: "hRPL13A/iso:1" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P40429-1
intersection_of: only_in_taxon NCBITaxon:9606 ! Homo sapiens
intersection_of: PR:000039399 ! 60S ribosomal protein L13a isoform 1

[Term]
id: PR:P19253-1
name: 60S ribosomal protein L13a isoform 1 (mouse)
def: "A 60S ribosomal protein L13a isoform 1 that is encoded in the genome of mouse." [PRO:DNx]
comment: Category=organism-sequence.
synonym: "mRPL13A/iso:1" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P19253-1
intersection_of: only_in_taxon NCBITaxon:10090 ! Mus musculus
intersection_of: PR:000039399 ! 60S ribosomal protein L13a isoform 1

[Term]
id: PR:000037779
name: 60S ribosomal protein L13a, initiator methionine removed acetylated and phosphorylated 1
def: "A 60S ribosomal protein L13a, initiator methionine removed form that has N-terminal Ala acetylation and it has been phosphorylated on a Ser residue within the consensus motif RxxS analogous to Ser-77 in UniProtKB:P40429. Example: UniProtKB:P40429, 2-203, Ala-2, MOD:00050|Ser-77, MOD:00046." [ECO:0000305, PMID:12962325, PMID:18995835, PRO:CNA, UniProtKB:P40429]
comment: Category=modification. Note: Evidence for methionine removed and N-terminal acetylation in the phosphorylated form is inferred by curator based on experimental evidence on these events based on sequence submitted to UniProt. Kinase=("DAPK3"; PR:O43293).
synonym: "RPL13A/InitMet-/AcPhos:1" EXACT PRO-short-label [PRO:DAN]
is_a: PR:000021288 ! 60S ribosomal protein L13a, initiator methionine removed form
relationship: has_part MOD:00046 ! O-phospho-L-serine
relationship: has_part MOD:00050 ! N-acetyl-L-alanine

[Term]
id: PR:000049071
name: 60S ribosomal protein L13a, initiator methionine removed phosphorylated form (human)
def: "A 60S ribosomal protein L13a (human) that has had the initiator methionine removed and that includes at least one phosphorylated residue. UniProtKB:P40429, 2-203, MOD:00696." [PRO:DNx, Reactome:R-HSA-156829]
comment: Category=organism-modification.
synonym: "PRO_0000133769, MOD:00696" EXACT PRO-proteoform-ftid [PRO:DNx]
synonym: "hRPL13A/InitMet-/PhosRes+" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P40429, 2-203, MOD:00696" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-156829 "PR:000049071 located_in GO:0005829"
intersection_of: has_part MOD:00696 ! phosphorylated residue
intersection_of: lacks_part PR:000021937 ! initiator methionine
intersection_of: PR:P40429 ! 60S ribosomal protein L13a (human)
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000037781
name: 60S ribosomal protein L13a, initiator methionine removed acetylated and unphosphorylated 1 (mouse)
def: "A 60S ribosomal protein L13a, initiator methionine removed acetylated and unphosphorylated 1 in mouse. UniProtKB:P19253, 2-203, Ala-2, MOD:00050|Ser-77, PR:000026291." [ECO:0000305, PMID:23071094, PRO:HJD, UniProtKB:P19253]
comment: Category=organism-modification. Note: Evidence for methionine removed and N-terminal acetylation in the unphosphorylated form is inferred by curator based on experimental evidence on these events based on sequence submitted to UniProt.
synonym: "mRPL13A/InitMet-/AcUnPhos:1" EXACT PRO-short-label [PRO:DAN]
synonym: "PRO_0000133770, Ala-2, MOD:00050|Ser-77, PR:000026291" EXACT PRO-proteoform-ftid [PRO:DNx]
synonym: "UniProtKB:P19253, 2-203, Ala-2, MOD:00050|Ser-77, PR:000026291" EXACT PRO-proteoform-std [PRO:DNx]
intersection_of: only_in_taxon NCBITaxon:10090 ! Mus musculus
intersection_of: PR:000037780 ! 60S ribosomal protein L13a, initiator methionine removed acetylated and unphosphorylated 1
relationship: has_part MOD:00050 ! N-acetyl-L-alanine

[Term]
id: PR:000037780
name: 60S ribosomal protein L13a, initiator methionine removed acetylated and unphosphorylated 1
def: "A 60S ribosomal protein L13a, initiator methionine removed form that has N-terminal Ala acetylation and it lacks phosphorylation on a Ser residue analogous to Ser-77 in UniProtKB:P19253. Example: UniProtKB:P19253, 2-203, Ala-2, MOD:00050|Ser-77, PR:000026291." [ECO:0000305, PMID:23071094, PRO:CNA, UniProtKB:P19253]
comment: Category=modification. Note: Evidence for methionine removed and N-terminal acetylation in the unphosphorylated form is inferred by curator based on experimental evidence on these events based on sequence submitted to UniProt.
synonym: "RPL13A/InitMet-/AcUnPhos:1" EXACT PRO-short-label [PRO:DAN]
is_a: PR:000021288 ! 60S ribosomal protein L13a, initiator methionine removed form
relationship: has_part MOD:00050 ! N-acetyl-L-alanine

[Term]
id: PR:000037783
name: 60S ribosomal protein L13a, initiator methionine removed acetylated and phosphorylated 1 (human)
def: "A 60S ribosomal protein L13a, initiator methionine removed acetylated and phosphorylated 1 in human. Phosphorylation occurs upon activation of the DAPK-ZIPK cascade. UniProtKB:P40429, 2-203, Ala-2, MOD:00050|Ser-77, MOD:00046." [ECO:0000305, PMID:12962325, PMID:18995835, PRO:CNA, UniProtKB:P40429]
comment: Category=organism-modification. Kinase=("DAPK3"; PR:000037784; Ser-77). Note: Evidence for methionine removed and N-terminal acetylation in the phosphorylated form is inferred by curator based on experimental evidence on these events based on sequence submitted to UniProt.
synonym: "hRPL13A/InitMet-/AcPhos:1" EXACT PRO-short-label [PRO:DAN]
synonym: "PRO_0000133769, Ala-2, MOD:00050|Ser-77, MOD:00046" EXACT PRO-proteoform-ftid [PRO:DNx]
synonym: "UniProtKB:P40429, 2-203, Ala-2, MOD:00050|Ser-77, MOD:00046" EXACT PRO-proteoform-std [PRO:DNx]
intersection_of: only_in_taxon NCBITaxon:9606 ! Homo sapiens
intersection_of: PR:000037779 ! 60S ribosomal protein L13a, initiator methionine removed acetylated and phosphorylated 1
relationship: has_part MOD:00046 ! O-phospho-L-serine
relationship: has_part MOD:00050 ! N-acetyl-L-alanine

[Term]
id: PR:000037782
name: 60S ribosomal protein L13a, initiator methionine removed acetylated and phosphorylated 1 (mouse)
def: "A 60S ribosomal protein L13a, initiator methionine removed acetylated and phosphorylated 1 in mouse. Phosphorylation occurs upon activation of the DAPK-ZIPK cascade. UniProtKB:P19253, 2-203, Ala-2, MOD:00050|Ser-77, MOD:00046." [ECO:0000305, PMID:23071094, PRO:HJD, UniProtKB:P19253]
comment: Category=organism-modification. Note: Evidence for methionine removed and N-terminal acetylation in the phosphorylated form is inferred by curator based on experimental evidence on these events based on sequence submitted to UniProt.
synonym: "mRPL13A/InitMet-/AcPhos:1" EXACT PRO-short-label [PRO:DAN]
synonym: "PRO_0000133770, Ala-2, MOD:00050|Ser-77, MOD:00046" EXACT PRO-proteoform-ftid [PRO:DNx]
synonym: "UniProtKB:P19253, 2-203, Ala-2, MOD:00050|Ser-77, MOD:00046" EXACT PRO-proteoform-std [PRO:DNx]
intersection_of: only_in_taxon NCBITaxon:10090 ! Mus musculus
intersection_of: PR:000037779 ! 60S ribosomal protein L13a, initiator methionine removed acetylated and phosphorylated 1
relationship: has_part MOD:00046 ! O-phospho-L-serine
relationship: has_part MOD:00050 ! N-acetyl-L-alanine