[Term] id: PR:000013281 name: pre-mRNA-splicing factor 38B def: "A protein that is a translation product of the human PRPF38B gene or a 1:1 ortholog thereof." [PRO:DNx] comment: Category=gene. synonym: "PRPF38B" EXACT PRO-short-label [PRO:DNx] synonym: "sarcoma antigen NY-SAR-27" EXACT [] is_a: PR:000000001 ! protein [Term] id: PR:Q95Y35 name: Y108G3AL.2 protein (worm) def: "A pre-mRNA-splicing factor 38B that is encoded in the genome of worm." [PANTHER:PTHR23142:SF0, PRO:DNx] comment: Category=organism-gene. synonym: "PRPF38B (worm)" EXACT PRO-short-label [PRO:DNx] xref: UniProtKB:Q95Y35 intersection_of: only_in_taxon NCBITaxon:6239 ! Caenorhabditis elegans intersection_of: PR:000013281 ! pre-mRNA-splicing factor 38B relationship: has_gene_template WormBase:WBGene00022434 ! Y108G3AL.2 (worm) [Term] id: PR:Q80SY5 name: pre-mRNA-splicing factor 38B (mouse) def: "A pre-mRNA-splicing factor 38B that is encoded in the genome of mouse." [OMA:Q80SY5, PRO:DNx] comment: Category=organism-gene. synonym: "Prpf38b" RELATED Gene-based [UniProtKB:Q80SY5] synonym: "mPRPF38B" EXACT PRO-short-label [PRO:DNx] xref: UniProtKB:Q80SY5 intersection_of: only_in_taxon NCBITaxon:10090 ! Mus musculus intersection_of: PR:000013281 ! pre-mRNA-splicing factor 38B relationship: has_gene_template MGI:1914171 ! Prpf38b (mouse) [Term] id: PR:Q5VTL8-1 name: pre-mRNA-splicing factor 38B isoform h1 (human) def: "A pre-mRNA-splicing factor 38B (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q5VTL8-1." [PRO:DNx, UniProtKB:Q5VTL8] comment: Category=organism-sequence. synonym: "hPRPF38B/iso:h1" EXACT PRO-short-label [PRO:DNx] xref: UniProtKB:Q5VTL8-1 is_a: PR:Q5VTL8 ! pre-mRNA-splicing factor 38B (human) relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:Q5VTL8-2 name: pre-mRNA-splicing factor 38B isoform h2 (human) def: "A pre-mRNA-splicing factor 38B (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q5VTL8-2." [PRO:DNx, UniProtKB:Q5VTL8] comment: Category=organism-sequence. synonym: "hPRPF38B/iso:h2" EXACT PRO-short-label [PRO:DNx] xref: UniProtKB:Q5VTL8-2 is_a: PR:Q5VTL8 ! pre-mRNA-splicing factor 38B (human) relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:000021117 name: pre-mRNA-splicing factor 38B, initiator methionine removed form def: "A pre-mRNA-splicing factor 38B that has had the initiator methionine removed." [PRO:DNx] comment: Category=modification. synonym: "PRPF38B/InitMet-" EXACT PRO-short-label [PRO:DNx] intersection_of: PR:000013281 ! pre-mRNA-splicing factor 38B intersection_of: lacks_part PR:000021937 ! initiator methionine [Term] id: PR:Q5VTL8 name: pre-mRNA-splicing factor 38B (human) def: "A pre-mRNA-splicing factor 38B that is encoded in the genome of human." [PRO:DNx, UniProtKB:Q5VTL8] comment: Category=organism-gene. synonym: "PRPF38B" RELATED Gene-based [UniProtKB:Q5VTL8] synonym: "hPRPF38B" EXACT PRO-short-label [PRO:DNx] synonym: "sarcoma antigen NY-SAR-27 (human)" EXACT [UniProtKB:Q5VTL8] xref: UniProtKB:Q5VTL8 intersection_of: only_in_taxon NCBITaxon:9606 ! Homo sapiens intersection_of: PR:000013281 ! pre-mRNA-splicing factor 38B relationship: has_gene_template HGNC:25512 ! PRPF38B (human) [Term] id: PR:Q6P7Y3 name: pre-mRNA-splicing factor 38B (zebrafish) def: "A pre-mRNA-splicing factor 38B that is encoded in the genome of zebrafish." [OMA:Q6P7Y3, PANTHER:PTHR23142:SF0, PRO:DNx] comment: Category=organism-gene. synonym: "prpf38b" RELATED Gene-based [UniProtKB:Q6P7Y3] synonym: "z-PRPF38B" EXACT PRO-short-label [PRO:DNx] xref: UniProtKB:Q6P7Y3 intersection_of: only_in_taxon NCBITaxon:7955 ! Danio rerio intersection_of: PR:000013281 ! pre-mRNA-splicing factor 38B relationship: has_gene_template ZFIN:ZDB-GENE-040426-2878 ! prpf38b (zebrafish) [Term] id: PR:Q6AXY7 name: pre-mRNA-splicing factor 38B (rat) def: "A pre-mRNA-splicing factor 38B that is encoded in the genome of rat." [OMA:Q6AXY7, PANTHER:PTHR23142:SF0, PRO:DNx] comment: Category=organism-gene. synonym: "Prpf38b" RELATED Gene-based [UniProtKB:Q6AXY7] synonym: "rPRPF38B" EXACT PRO-short-label [PRO:DNx] xref: UniProtKB:Q6AXY7 intersection_of: only_in_taxon NCBITaxon:10116 ! Rattus norvegicus intersection_of: PR:000013281 ! pre-mRNA-splicing factor 38B relationship: has_gene_template RGD:1562940 ! Prpf38b (rat)